SubtiBank SubtiBank
gpsB [2019-01-18 11:55:48]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

gpsB [2019-01-18 11:55:48]

required for removal of [protein|A8EEC896B279CFDDE9C3A6F146A04EC822E33A4F|PBP1] from the cell pole after completion of cell pole maturation
locus
BSU22180
pI
5.63
mw
11.45 kDa
protein length
98 aa Sequence Blast
gene length
294 bp Sequence Blast
function
[SW|cell division], cell elongation
product
[protein|search|cell division] protein, member of the [protein|search|divisome]
essential
no
synonyms
ypsB
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.1|Cell envelope and cell division] → [category|SW 1.1.8|Cell division] → [category|SW 1.1.8.2|Other genes]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.6|Phosphorylation on a Thr residue]

    • Gene

    Coordinates
    2,331,779 → 2,332,075

    Phenotypes of a mutant

  • synthetic lethal phenotype with a ''[gene|672EA84D7725BE21F649DF30A11EB4E0EDFC3925|ftsA]'' mutation [Pubmed|18776011]; synthetic sick phenotype when combined with an ''[gene|B317D7E51824DD70EF84E4D5D7290D601BF4FAB6|ezrA]'' mutation [Pubmed|18363795], although this seems controversial [Pubmed|18776011]
  • reduced growth at high salt [Pubmed|25845974]

    • The protein

    Catalyzed reaction/ biological activity

  • activates [protein|23FF4A00C36EC1B7297F51A9EF3579B41F0B7EBA|PrkC] [Pubmed|25845974]

    • Paralogous protein(s)

  • [protein|A8C0C2B7BCA6FFFF3811402D683FB7B99F7120A4|DivIVA]

    • [SW|Domains]

  • contains a [protein|A8C0C2B7BCA6FFFF3811402D683FB7B99F7120A4|DivIVA]-like N-terminal domain

    • Modification

  • phosphorylation on Thr-75 by [protein|23FF4A00C36EC1B7297F51A9EF3579B41F0B7EBA|PrkC] [Pubmed|25845974,17218307]

    • Structure

  • [PDB|4UG3] (N-terminal domain, aa 1-68) [Pubmed|26575090]
  • [PDB|5AN5] (C-terminal domain, aa 76-98) [Pubmed|26575090]
  • GpsB is hexameric (trimer of dimers) [Pubmed|26575090]

    • [SW|Localization]

  • dynamic, shuttles between lateral membrane and the divison septum [Pubmed|18363795], localizes to the divisome after Z-ring formation [Pubmed|18776011]

    • Expression and Regulation

    Operons

    genes
    [gene|C22F7704DC9D36D96FE089ADCEA546D7A3FB3739|gpsB]-[gene|57A79AAF00243B5E058FA901D43AA7B55CA33F63|rnpB]-[gene|0DF27BEAF763545258CE7DD56F65CD5BF74DD887|ypsC]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-A472 (gpsB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/472 NBRP B. subtilis, Japan]
  • 1A934 ( ''gpsB''::''kan''), [Pubmed|18776011], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A934&Search=1A934 BGSC]
  • 1A970 ( ''gpsB''::''kan''), [Pubmed|18776011], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A970&Search=1A970 BGSC]
  • BKE22180 (Δ[gene|C22F7704DC9D36D96FE089ADCEA546D7A3FB3739|gpsB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE22180 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTTTCACCTCGTATC, downstream forward: _UP4_TGATCACGCTTGAAAAAAAT
  • BKK22180 (Δ[gene|C22F7704DC9D36D96FE089ADCEA546D7A3FB3739|gpsB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK22180 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTTTCACCTCGTATC, downstream forward: _UP4_TGATCACGCTTGAAAAAAAT

    • GFP fusion

  • [Pubmed|18363795,18776011]

    • two-hybrid system

  • [Pubmed|18363795]

    • Antibody

  • raised against L. monocytogenes GpsB [Pubmed|26575090] available in [SW|Sven Halbedel] 's lab

    • References

  • 18776011,25845974,19429628,17218307,18363795,26575090,27257764,30277210